I cannot speak specifically of any particular religion. In general, I will note only two points.
First. One who is strongly immersed in materialistic worldview, will have difficulty in understanding scripture in non literalist mode. I have seen so called scholars see sexual matters in scripture when there may not be any such thing. Even, adherents of religions attack scripture of religions other than theirs in ignorant mode — often wilfully.
Second. Scripture present spirit-god-reality at three or more levels: dual, pantheism, panentheism-non dual. Even religious-spiritual people keep arguing on these differences. The empiricist cannot even have any inkling of such layered presentation.