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prove me wrong on evolution

JerryL

Well-Known Member
Been there, done that. They don't know what modifies the genome. Is it cosmic rays?
Replication errors (which have a variety of influencing characteristics, mostly chemical), transposition errors, viral insertions, etc.

That's mighty hard for me to swallow given that the rewrite has to be oh so very specific, and that there would also be tons of mistakes along the way.
Appeal to incredulity?

And since we've only ever seen damaged genes or deformities passed on
Sickle-cell gene

[no new organs, and no, an extra finger doesn't count]
Evolutionarily speaking, when did the last "new" organ appear?

Mutation is said to be a random process. Probability is precisely the math you would use for describing a random process. That's what it was invented for [discovered actually, math being independant of everything, even evolution]. Probability is my guide, not my proof. I was focusing in on things like the geometry problem because that's where probability steered me as you'll see a little later. I also applied probability specifically to the geometry problem [which is a seperate use of it] but that was just to say that the geometry is accurate or 'non-negotiable' [probability=0]...imo
Mutation is not a random process, it is a chaotic process. You are contradicting your earlier statement that physics is the underpinning of the universe by asserting that it's random.

I'm having trouble believing in evolution. I'm talking dinos into birds, not the minor stuff. Whether the mechanisms are the same for big and little changes doesn't interest me. What interests me is identifying a naturally occuring accidental phenomenon that will safely rewrite the genome [of anything] to turn it into something NEW.
Give me a specific, genetic, definition of "new". What alliel change is actually the "new" one?

I learn't a lot about mathematics from the work of Fred Hoyle. Yes Fade, he's got an alternative to evolution [no it's not my cup of tea either]. I understand that the creationist crowd credit him with saying that the first life/protein whatever could not have happened. That argument of his is widely dismissed, but also widely misunderstood in my opinion. Natural selection is not actually chance, and that's where they shot him down, but I believe the first self-replicator was subject to chance if you view it's coming together as a 'mutation': it was it's own genome, a genome that previously didn't exist, new info was added. Funny that, how little things slip away.
Tell me what the first used DNA strand contained. How long was it? How many failed attmepts to create it? What were the cules of chemestry governing it's creation? Were there certain sets inclined towards coming together? What influences were on it?

You don't know? Then you can't compute odds.

Roger Penrose, the guy who proved [imo] you can't do true AI with binary computing, also taught me a lot through his profound writings.
I'd say that he's wrong.

My conclusion, armed with data regarding proteins that Hoyle never had in his day, is that Hoyle was right [laugh, boo, whatever u do..]. Even with a single molecule the odds are against it. That doesn't mean it didn't happen, just that it wasn't very likely to have happened the way it is described.
You don't have enough information to conclude that.

I'm detecting an assumption that in my earlier posts I was applying probability theory to abiogenesis, which is actually seperate from evolution, some say. I wasn't, but before I tell you what I was applying it to let's have a quick look at abiogenesis anyway.
Of coruse you were after abiogenesis. You discuss the odds of a single molecule forming.

It has been estimated that something as simple as a single protein of maybe 24-36 amino acids in length constituted the first self-replicating lifeform. However [and it's abig one], there really is NO confirmation of this.
Of course there isn't. That's why abiogenesis is a hypothesis and not a theory.

Luckily the egg was smart enough to know what a chicken looked like.
Eggs have no brains and "know" nothing. You really need to work on your biology.

The eggs' mother must have been so proud, after all, she didn't know what a chicken looked like. Even though the eggs stopped replicating the chickens knew exactly how to make more anyway so everyone was happy! A biological tribar?
Again some basic mistakes of biology. I doubt pre-chickens felt "pride" and consider it unlikely that the pre-chickens noticed the difference anyway. You can't really have speciation in any one generation anyway, it's a problem with the fact that they are simply groupings.

Not if you come to face the fact that once you accept the theory of evolution then any apparent change is automatically explained. For example, if a change is detected [ a new fossil perhaps?], nobody says "Hey, I don't think this one happened because of evolution, we'd better call in CSI to check it out". When you heard about the pocket of unique life in Papua the other day did you think of anything other than evolution?
Why should I. If there's an anomoly, then it will pop up when the new species are studited and an attempt is made to integrate them.

When at 7am it gets bright outside, you assume it's the sun. Why don't you think that a second star just appeared?

Notice how the folks on the sub-continent are all mid-brown? They stayed in one area long enough for the gene pool to even out with the majority dominant genes winning. NO NEW GENES
We don't have an exact figure on the number of gense in the human body, so there's no way to tell if there are new genes popping up.

This basic gene-mixing and unmixing does not make new genes that are encoded for new organs and so on. I still think it is sad that science has devolved to this. Somehow I get the feeling you still won't see it. That's OK, I admit I'm not a very good communicator.
New organs are extremely rare. For the most part, we have the same organs as the worms which are the earliest animals.

I accept this kind of speciation, although it doesn't add the 'new stuff' to the gene pool.
Genetically speaking, what is "new stuff".

If a replication error occurs which changes GATTACTTA to ATCATTTAG, was "new stuff" added?

I said "...in the time geologists say has passed". That's a very short time for so many original features, let alone all the variations. This one is pure math, it simply doesn't add up. Admittedly my numbers are my own, but I am being very conservative in my count of special features and very generous in my features per-generation numbers. Still does not compute. Guess that one is my personal opinion, there's no reason for you to trust my math. And Fade, this one is not probability, it's simply addition.
Whip the math on out.

We've had 4,000,000,000 years of evolution, what are you setting as generation rate? (many organisms have generations in hours or minutes)?
 

Bishadi

Active Member
Strong JerryL ...... can you address Molecular automata in relation to phasing, most forms are 2 phased and in another 3 phased. I was sapped by not addressing this and I noticed what an idiot I can be when arrogance just tries to be cool.



Here is a link for 2 phase http://xxx.lanl.gov/ftp/q-bio/papers/0512/0512025.pdf



And here for three phase http://nicosia.is.s.u-tokyo.ac.jp/MCP/eng/mcp.html



In both frameworks it can be noted that molecular biology is changing in scientific descriptions as well as if you use emr as the basis, which it is, it is basically how both models of predictability work.



Let’s offer another basis. Within biology new descriptions will have a few additions in chemical processes … http://cnx.rice.edu/content/m12592/latest/ … which directly is addressing the resonances applied to the neighborhood.



Schrödinger would be proud.



This resonance will be recognized as a defined level in quanta and these linear adjustments result in maximum wave lengths available to the structures and neighborhood. Where one structure can accept the increase another become an immediate catalyst within its neighborhood, while another simply allows the resonance to move on through. But my point here is in this framework finally the reactions will address the neighborhood effects and many will see just how ignorant science has been.



A little more later…..
 

rocketman

Out there...
Thanks for replying.

Fade said:
Asking questions that have already been answered by science and then pretending that they haven't doesn't strike me as being particularly Scientific. Like I said before, the evolution of the hinged jaw is pretty well documented. If memory serves the theory goes that it had something to do with gills in early jawless fish. try googles book search.
The problem I am talking about is a legitimate question, even to this day, and no amount of saying 'it's well documented' is going to give an answer that doesn't yet exist. Scientists are still trying to figure it out, and although there has been plenty of speculation, the ACTUAL intermediate jaw is unknown. The best attempt I've seen so far to explain it from a combined genetic/mechanical view can be found here: http://pharyngula.org/index/weblog/comments/evolution_of_the_jaw/ At least they have the balls to admit that it's still hypothetical [the word appears several times]. My take on this piece is that it requires a lot of mutations that aren't good candidates for selection until a great many generations when suddenly they are again. Seems a touch extraneous, but not impossible. However, given the small number of genes involved and the fact that things are growing out into nowhere, it's easy to see that this one is pure speculation, especially when extra complexity is added downstream, ie: which came first, the jaw or the teeth? Hard to see how selection is going to be able to move forward with this model, so many features rely on other features it's not funny. There is an overwhelming desire to explain how one fossil got to another fossil, and whether it's proven or not, the explanation is ALWAYS accepted if it is logical. That's not what I call science. And after all that there is still no sign of an intermediary geometry, and certainly nothing like an explanation of how an irreducible geometry like an inline twin-pivot hinge can be selected from the available options. I would apply similar principles of argument to the inner ear, another specific geometry. [perhaps we had a different mechanism and the modern inner-ear took over later on? I'd find that much more acceptable].

It is common knowledge that issues like these are not fully understood. Consider this statement: "The development of the jaw is one of the most significant evolutionary events in early vertebrate history. Little is known about the jaw's origins, however, due to a poor fossil record of the critical time when the first jaws evolved, sometime before the Devonian period (412 - 354 million years ago). " It came from here: http://www.amnh.org/museum/press/breaking/jaw.html and is far from atypical.

To believe something to have truly have evolved from one thing into another thing is not proven by two different fossils. Prove me wrong on that.


Fade said:
I just threw up a little...
Get well soon:hug:


JerryL said:
Replication errors (which have a variety of influencing characteristics, mostly chemical), transposition errors, viral insertions, etc. ...Sickle-cell gene ....Evolutionarily speaking, when did the last "new" organ appear?
The usual stuff, yeah, I know. Now, what is the mechanism that makes something get a new organ/function? Look at what they can't do! We'll use the fruit-fly as an example. There are over 2900 mutations documented for this little baby and they've been trying all sorts of things on it for years, including bombarding it with x-rays. You'd think that there would be at least one sign of change towards something else, but it's still totally a fruit fly. The variations have all been fruit flys, some ugly, some pretty, but all fruit flys. Why no drastic changes? These things are getting plenty of gene altering influences, maybe more than they would ever get in the field. There was one with four wings [a repeat of existing dna, like an extra finger] but it apparently could hardly fly so it would've been less selectable anyway. Given the sophistry of even the simplest dna [there are many error-checking and correction mechanisms built into dna/rna as I'm sure you know] and the fact that we can't do it in the lab with full control of the conditions, then how can anyone expect me to believe it could happen in the field. What's the mechanism if it did? I need proof, not speculation.

The interdependancy in even the simplest animals is an even bigger problem. It's not yet been shown that you can mutate a control gene [which theoretically could change the phenotype] without ruining the animal. Doesn't anyone have the common sense to realise that if this had been done there would have been a storm of excitement and we'd still be hearing about it? So, provided you figure out how to do the kind of mutation I'm talking about, the problems may in fact multiply. I'm looking for really new genetic information, not old information to be rerouted to produce variatons of the existing animal. New animals means Selection must have something new to choose from.


JerryL said:
Mutation is not a random process, it is a chaotic process. You are contradicting your earlier statement that physics is the underpinning of the universe by asserting that it's random.
"Mutation: Random change in the genetic code."

http://www.micro.utexas.edu/courses/levin/bio304/popgen/mutation.html

It's certainly seen as random. And what makes you think you can't apply a predictive operation to a chaotic event? The case here for an application of quantum-probability is a good one.



JerryL said:
Of course there isn't. That's why abiogenesis is a hypothesis and not a theory.
I'm glad we agree on something :clap

And so...
I look at the theory of evolution and I grow more and more weary of the universal dismissal of anything that looks different. I remeber how I was sad to hear that when they dug up a T-rex last year with tissue on[in] the bone the first things they were concerned with was how it got preserved : "These factors, combined with as yet undetermined geochemical and environmental factors, presumably also contribute to the preservation of soft-tissue vessels." [ http://www.sciencemag.org/cgi/content/full/307/5717/1952 ] NOBODY even thought to say that it might be younger than expected. [Also notice they haven't got a clue as to how it got preserved]. I mention this one because it shows that even when they dig up a T-rex with tissue that looks like it just died they still automatically attempt to turn the situation around to suit the theory. All facts happen to fit the theory you know. Surely someone with an open mind could've said "Let's think about this from all angles just in case we're wrong". But no, science has lost it's frontier edge. It's all academic now folks. I stand by my first post when I said that I don't believe in evolution like I do in gravitaton. Evolution is neither here nor there for me now. I will continue looking into it but I refuse to be a sheep and accept it as a done deal. I've accepted parts of it in my earlier posts, but the feeling I get is that the overall theory itself is missing something; there are just too many questions for my liking.

Work is really catching up with me so it'll be quite a while before I get a chance to post again. By all means have the last word folks, I'm not here to atttack anyone. Thanks all for trying to help me.
 

painted wolf

Grey Muzzle
first off on the T.rex... the bones had to be chemically treated to procure the small samples of flexable tissue.. they certenly wern't "like new" bones. ;)
they do have a good idea of how the bones preserved the trace ammounts of flexable tissue, I'll see if I can find the article.

Teinolophos trusleri fossils show the beginings of seperation from a single jaw bone to the formation of the three inner ear bones. What is intresting about the find is that it indicates that the three ear bones of the mammal liniage, evoloved twice, once in Therians and once in Montremes.
http://www.sciencedaily.com/releases/2005/02/050212203647.htm

also as to the dino/bird changeover, what do you consider a bird? what do you consider a dinosaur? And where do you draw the line between them?
Is it feathers?
Is it wings? two wings only or can it have four?
claws/teeth/feet/ egg laying patterns/ growth patterns/ something elce?

Jeholornis : http://dino.lm.com/images/display.php?id=687
various dinosaurs: http://dino.lm.com/images/display.php?id=2044
Yandangornis : http://dino.lm.com/images/display.php?id=1808
Microraptor : http://dino.lm.com/images/display.php?id=1858
Rahonavis : http://dino.lm.com/images/display.php?id=1807
Caudupteryx : http://dino.lm.com/images/display.php?id=468

where is the line between one group and the other?

wa:do
http://www.sciencedaily.com/releases/2005/02/050212203647.htm
 

JerryL

Well-Known Member
Strong JerryL ...... can you address Molecular automata in relation to phasing, most forms are 2 phased and in another 3 phased.
Please be more specific in your question. To answer your question as asked: "possibly".
 

JerryL

Well-Known Member
The usual stuff, yeah, I know. Now, what is the mechanism that makes something get a new organ/function?
Mutation

Look at what they can't do! We'll use the fruit-fly as an example. There are over 2900 mutations documented for this little baby and they've been trying all sorts of things on it for years, including bombarding it with x-rays. You'd think that there would be at least one sign of change towards something else, but it's still totally a fruit fly.
What charicteristics would make it "not a fruitfly"?

You've seen the ones with more legs, no wings, extra wings, legs on their heads, different shapes, different eye colors. Again, what would constitute "not a fruitfly".

I'll give you an easier one. Go through the skulls from primate to modern human and tell me which one the first human is... are are you going to point out that we have nothing chimps don't have and are therefore chimps.

The interdependancy in even the simplest animals is an even bigger problem. It's not yet been shown that you can mutate a control gene [which theoretically could change the phenotype] without ruining the animal. Doesn't anyone have the common sense to realise that if this had been done there would have been a storm of excitement and we'd still be hearing about it?
Give an example of a "control gene" which cannot be mutated.

"Mutation: Random change in the genetic code."

http://www.micro.utexas.edu/courses...n/mutation.html
It's not random. There is no randomness in chemestry, only chaos.

It's certainly seen as random. And what makes you think you can't apply a predictive operation to a chaotic event? The case here for an application of quantum-probability is a good one.
You can make some predictions of chaotic events; I've cited the specific problems with your arbitrary numbers.

I look at the theory of evolution and I grow more and more weary of the universal dismissal of anything that looks different. I remeber how I was sad to hear that when they dug up a T-rex last year with tissue on[in] the bone the first things they were concerned with was how it got preserved : "These factors, combined with as yet undetermined geochemical and environmental factors, presumably also contribute to the preservation of soft-tissue vessels." [ http://www.sciencemag.org/cgi/conte...l/307/5717/1952 ] NOBODY even thought to say that it might be younger than expected.
http://www.answersingenesis.org/creation/v19/i4/blood.asp

Of course, he lies in regards to several basic facts of the case; but he did think to say it was young... Painted Wolf has addressed this so I will not repeat.
 

JerryL

Well-Known Member
Give some evodence on macro evolution, not micro evolution or somehow tie them together, solidly
No such thing as "macroevolution" or "microevolution". What, specifically are you looking for? Speciation?
 

Bishadi

Active Member
DanDanTheCoffeyMan said:
Give some evodence on macro evolution, not micro evolution or somehow tie them together, solidly
There are various kinds of dynamics of macroevolution. Punctuated equilibrium theory proposes that once species have originated, and adapted to the new ecological niches in which they find themselves, they tend to stay pretty much as they are for the rest of their existence. Phyletic gradualism suggests that species continue to adapt to new challenges over the course of their history. Species selection and species sorting theories claim that there are macroevolutionary processes going on that make it more or less likely that certain species will exist for very long before becoming extinct, in a kind of parallel to what happens to genes in microevolution.

or try and run the theories of evolution and theology in parallel ... both are suspect as written! But both have grounds to be acknowledged until we have "solid proof."

But common sense is quite applicable; man coming from woman or woman coming from man?

You make the call but if you think the W came from M then we can assume biology is just for fun or to Payith taxes with'ith.
 

Endless

Active Member
:D Had a good laugh when i read this:

Darwin, on the other hand, saw no fundamental difference between microevolution and macroevolution. He asserted that "Certainly no clear line of demarcation has as yet been drawn between species and sub-species — that is, the forms which in the opinion of some naturalists come very near to, but do not quite arrive at, the rank of species: or, again, between subspecies and well-marked varieties, or between lesser varieties and individual differences. These differences blend into each other by an insensible series; and a series impresses the mind with the idea of an actual passage." (Darwin, 77)
Umm, Darwin didn't even know about DNA, about mutation or any biochemical processes:sarcastic So hardly surprising he didn't see any fundamental difference between microevolution and macroevolution :D You only see it at the genetic level. Just a word of caution, Wikipedia can have articles written by anyone in it, it's not authorative so just be careful when using it.



 

Fade

The Great Master Bates
Endless said:
:D Had a good laugh when i read this:
Umm, Darwin didn't even know about DNA, about mutation or any biochemical processes:sarcastic So hardly surprising he didn't see any fundamental difference between microevolution and macroevolution :D You only see it at the genetic level. Just a word of caution, Wikipedia can have articles written by anyone in it, it's not authorative so just be careful when using it.
The article doesn't say Darwin knew about DNA did it? So why was it funny?

What is the difference between macro/micro at the genetic level?
 

Endless

Active Member
Sorry perhaps i should have elaborated :)

There is absolutely no way Darwin could have seen a fundamental difference between microevolution and macroevolution - all he actually saw was change in the physical appearance of animals. He didn't even know there was such a thing as microevolution and something else known as macroevolution - he couldn't possibly have known because at that time they didn't know about DNA, mutations or biochemical processes in the animals.
The difference is found at the genetic level, because it's there you can see whether new processes and new proteins etc have come into being that previously didn't exist - as you have to have happening to give macroevolution. Taking for example the increasing in size of a birds beak - to Darwin this was evolution, evidence of the process that could eventually change the bird into a new creature given the time. However at the genetic level we might not even see a mutation as having caused this increase in beak size of the bird population, merely natural selection sorting existing genetic material to give birds with bigger beaks. Say there's a shortage of the bird's natural food source on the Island and the bigger beaks allow the bird to crack a harder seed - while birds with the smaller beaks can't. This natural selection will mean that birds with bigger beaks survive and smaller beaks die out. Come back in a few years and all the birds will have the big beaks.
That's just a quick example of microevolution - there's no mutuation which you have to have to give rise to new things within the bird and so change the bird over time into something else - so it isn't what we call macroevolution. But Darwin would not have been able to tell the difference between them - he didn't even have a concept of these two types of change, so there was no way he was going to see a difference between them :D So that was what was funny. Hope that helps a bit, feel free to ask anything else as i'd be happy to help.
 

JerryL

Well-Known Member
The difference is found at the genetic level, because it's there you can see whether new processes and new proteins etc have come into being that previously didn't exist - as you have to have happening to give macroevolution. Taking for example the increasing in size of a birds beak - to Darwin this was evolution, evidence of the process that could eventually change the bird into a new creature given the time. However at the genetic level we might not even see a mutation as having caused this increase in beak size of the bird population, merely natural selection sorting existing genetic material to give birds with bigger beaks. Say there's a shortage of the bird's natural food source on the Island and the bigger beaks allow the bird to crack a harder seed - while birds with the smaller beaks can't. This natural selection will mean that birds with bigger beaks survive and smaller beaks die out. Come back in a few years and all the birds will have the big beaks.
That's just a quick example of microevolution - there's no mutuation which you have to have to give rise to new things within the bird and so change the bird over time into something else - so it isn't what we call macroevolution. But Darwin would not have been able to tell the difference between them - he didn't even have a concept of these two types of change, so there was no way he was going to see a difference between them :D So that was what was funny. Hope that helps a bit, feel free to ask anything else as i'd be happy to help.
So your definition of "macroevolution" is "Genertic change which causes a different protien"?

http://ghr.nlm.nih.gov/info=mutations_and_disorders/show/mutations_cause_disease
http://www.cancer.gov/cancertopics/understandingcancer/genetesting/Slide11
http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/M/Mutations.html

Sickle-cell, for example, replaces of A by T at the 17th nucleotide of the gene for the beta chain of heomglobin changes the condon GAG to GTG. Thus the 6th amino acid in the chain becomes valine instead of glutamic acid.

So, by your definition, the sickle-cell gene would prove macroevolution (interestingly, you allow for macroevolution without speciation).
 

Endless

Active Member
Hi,
My definition of macroevolution is mutation which brings about a new protein with a new function that confers an advantage or is neutral to the organism in question. However it must perform a new function and fit into the biochemical pathways of the organism. This is the only way you are going to get new things appearing in a creature that weren't there before, then these new things build up and the creature starts changing - evolving into a completely new creature.

Sickle cell anaemia isn't an example of macroevolution because although in somecases it can confer an advantage (against malaria if you are heterozygous) the beta-chain of the haemoglobin still performs the same task it did before - except at a slight disadvantage when heterozygous (if you are homozygous for it you are in big big trouble).
 

JerryL

Well-Known Member
My definition of macroevolution is mutation which brings about a new protein with a new function that confers an advantage or is neutral to the organism in question.
"Advantage" is subjective. You've now created an absurd case where the envyronment is defining the term rather than the gene itself.

However it must perform a new function and fit into the biochemical pathways of the organism.
What does that even mean? You seem to be making this up as you go along.

This is the only way you are going to get new things appearing in a creature that weren't there before, then these new things build up and the creature starts changing - evolving into a completely new creature.
What "new thing" does a human have that a chimp does not? Or do you believe that a chimp is the same "kind" as a person?

Sickle cell anaemia isn't an example of macroevolution because although in somecases it can confer an advantage (against malaria if you are heterozygous) the beta-chain of the haemoglobin still performs the same task it did before - except at a slight disadvantage when heterozygous (if you are homozygous for it you are in big big trouble).
So your complaint is that the new information with the new protien caused by the new gene does the same "task" as the old one?
 

Endless

Active Member
Hi JerryL,
Before we carry on any further would you let me know what level of biology you have studied up to - also as you read this does 'frameshift' 'gene expression' 'homozygous' 'heterozygous' 'active site' and 'recombination' mean anything to you . ie. are you familar with these terms and can you let me know which you familar with? All this before looking them up :)
The only reason i ask is that i want to know what level i can explain things at without it meaning nothing to you.
Thanks

Ps. I've actually made no complaint so far in what i have written, i'm just explaining things.
 

JerryL

Well-Known Member
Endless said:
Hi JerryL,
Before we carry on any further would you let me know what level of biology you have studied up to - also as you read this does 'frameshift' 'gene expression' 'homozygous' 'heterozygous' 'active site' and 'recombination' mean anything to you . ie. are you familar with these terms and can you let me know which you familar with? All this before looking them up :)
The only reason i ask is that i want to know what level i can explain things at without it meaning nothing to you.
General "college 10 years ago" stuff. Know every one of those terms except "active site" (which is to say, I'm not aware of a particular such term in biology, the words obviously make sense).
 

Yerda

Veteran Member
JerryL said:
"Advantage" is subjective. You've now created an absurd case where the envyronment is defining the term rather than the gene itself.
What's wrong with that?
 
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